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#furrr

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Michael Sumner<p>we ran a multi-decade extraction of points-in-time for 46000 points 1993-2024 (at bottom level, it's variable so we indexed the level upfront for each point) ran this the "traditional way" using <a href="https://rstats.me/tags/terra" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>terra</span></a> <a href="https://rstats.me/tags/GDAL" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>GDAL</span></a> to extract points from relevant layers (point-sets grouped by date,level) for salt,temp,u,v,w,mld - ran on 28cpus with <a href="https://rstats.me/tags/furrr" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>furrr</span></a>/#future took ~80min </p><p>will get a public dataset to repeat the example for illustration (elephant seals I hope)</p>
Michael Sumner<p><a href="https://rstats.me/tags/rstats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>rstats</span></a> future_map in <a href="https://rstats.me/tags/furrr" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>furrr</span></a> on <a href="https://rstats.me/tags/slurm" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>slurm</span></a> has stopped being my friend ... multicore or multisession, both take way longer than normal - tested on small sets with 6 cores, smallish sets with 24, and the real job with 128 cores</p><p>parallel::parLapply works fine in the small or all 128 cores</p><p>any ideas?</p>