CodeRefinery<p>Bring your own classroom to a <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> workshop! Provide a learning space, without organizing a full training by yourself. Materials are open, lectures streamed, the only thing you have to do is facilitate the learning experience!</p><p>Read more about the concept: <a href="https://coderefinery.org/blog/bring-your-own-classroom/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">coderefinery.org/blog/bring-yo</span><span class="invisible">ur-own-classroom/</span></a></p><p><a href="https://fosstodon.org/tags/RSEng" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RSEng</span></a></p>
Recent searches
No recent searches
Search options
Not available on mastodon.xyz.
mastodon.xyz is one of the many independent Mastodon servers you can use to participate in the fediverse.
A Mastodon instance, open to everyone, but mainly English and French speaking.
Administered by:
Server stats:
743active users
mastodon.xyz: About · Profiles directory · Privacy policy
Mastodon: About · Get the app · Keyboard shortcuts · View source code · v4.3.4
#coderefinery
0 posts · 0 participants · 0 posts today
Aalto Scientific Computing<p>Interested in how we do our online teaching: production values, streaming, everyone can attend, videos and materials available immediately? The <span class="h-card" translate="no"><a href="https://fosstodon.org/@coderefinery" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>coderefinery</span></a></span> Train the Trainer workshop will go over it all, 4 Tuesdays starting tomorrow EU mornings. Online, you can drop by for the days that interest you.</p><p><a href="https://fosstodon.org/@coderefinery/112913487426684269" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">fosstodon.org/@coderefinery/11</span><span class="invisible">2913487426684269</span></a><br><a href="https://fosstodon.org/tags/OnlineTeaching" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>OnlineTeaching</span></a> <a href="https://fosstodon.org/tags/HPC" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>HPC</span></a> <a href="https://fosstodon.org/tags/SciComp" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SciComp</span></a> <a href="https://fosstodon.org/tags/RSEng" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RSEng</span></a> <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a></p>
CodeRefinery<p>TTT4HPC today was excellent, and we had a great presentation on containers (and one of our best lessons, period): If you've wondered what they are and how to use them for <a href="https://fosstodon.org/tags/SciComp" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SciComp</span></a> / <a href="https://fosstodon.org/tags/RSEng" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RSEng</span></a> on <a href="https://fosstodon.org/tags/HPC" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>HPC</span></a>/desktop, this is the starting point you need. </p><p>Video is processed: <a href="https://youtu.be/9nHhB3Tn_BU" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="">youtu.be/9nHhB3Tn_BU</span><span class="invisible"></span></a><br>Material: <a href="https://coderefinery.github.io/ttt4hpc_containers/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">coderefinery.github.io/ttt4hpc</span><span class="invisible">_containers/</span></a></p><p><a href="https://fosstodon.org/tags/Apptainer" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Apptainer</span></a> <a href="https://fosstodon.org/tags/Singularity" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Singularity</span></a> <a href="https://fosstodon.org/tags/containers" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>containers</span></a> <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a></p>
CodeRefinery<p>Tuesday Tools and Techniques for <a href="https://fosstodon.org/tags/HPC" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>HPC</span></a> is now live on <a href="https://fosstodon.org/tags/livestream" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>livestream</span></a>. Today's lesson are about containers on clusters, and lasts about two hours starting from now (with exercises in the afternoon).<br>Stream: <a href="https://twitch.tv/coderefinery" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="">twitch.tv/coderefinery</span><span class="invisible"></span></a><br>Course: <a href="https://scicomp.aalto.fi/training/scip/ttt4hpc-2024/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">scicomp.aalto.fi/training/scip</span><span class="invisible">/ttt4hpc-2024/</span></a><br><a href="https://fosstodon.org/tags/SciComp" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SciComp</span></a> <a href="https://fosstodon.org/tags/RSEng" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RSEng</span></a> <a href="https://fosstodon.org/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a></p>
CodeRefinery<p><a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> team meeting 2024 May 6:<br> <br>Today's topic was the next CodeRefinery <a href="https://fosstodon.org/tags/workshop" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>workshop</span></a>. </p><p>We have coordinators, so it's a go: Dates will be 10.-12.9 & 17.-19.9.2024, we will stick to the same format as the last workshop. </p><p>This time we want to especially emphasize the connection to universities/groups to collaborate with us, advertise the workshop or have their audience attend, and provide local support afterwards. </p><p>Join us: <a href="https://coderefinery.org/join/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="">coderefinery.org/join/</span><span class="invisible"></span></a></p>
CodeRefinery<p>Would you like to be part of the next <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> workshop?</p><p>- We are looking for new instructors, contributors and helpers! You'll get onboarding, mentoring and an exciting opportunity to share your passion! </p><p>Join us for planning today, 06.05 at 14 CEST at <a href="https://coderefinery.org/join/meetings/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">coderefinery.org/join/meetings</span><span class="invisible">/</span></a></p><p><a href="https://fosstodon.org/tags/SciComp" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SciComp</span></a> <a href="https://fosstodon.org/tags/FAIR" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>FAIR</span></a> <a href="https://fosstodon.org/tags/collaboration" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>collaboration</span></a></p>
CodeRefinery<p>Do you have questions about applying <a href="https://fosstodon.org/tags/RSEng" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RSEng</span></a> concepts learned in the <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> workshop last week to your own work?</p><p>-> 'Bring your own code' today or next week's Tuesday at 13-15 CET and discuss with our specialists (zoom link in wrap up email)</p><p><a href="https://fosstodon.org/tags/SciComp" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SciComp</span></a> <a href="https://fosstodon.org/tags/OpenScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>OpenScience</span></a> <a href="https://fosstodon.org/tags/FAIR" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>FAIR</span></a></p>
CodeRefinery<p>It's a wrap! </p><p>On Thursday we concluded our 9th large online <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> workshop. </p><p>It seemed our updated <a href="https://fosstodon.org/tags/git" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>git</span></a> lesson was well received, which makes the hard work worth it! </p><p>Thanks to everyone involved, this would not have been possible without you <3</p><p>All materials, recordings, and Q&A will remain available indefinitely (and are suitable for independent study) : <a href="https://coderefinery.github.io/2024-03-12-workshop/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">coderefinery.github.io/2024-03</span><span class="invisible">-12-workshop/</span></a></p><p><a href="https://fosstodon.org/tags/RSEng" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RSEng</span></a> <a href="https://fosstodon.org/tags/SciComp" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SciComp</span></a></p>
CodeRefinery<p>Join us for <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> day 6 on Thursday: Before lunch we see "Testing" (pytest, Github Actions). After lunch is "modular code development" where you'll see how we slowly transition an ad-hoc analysis in <a href="https://fosstodon.org/tags/Jupyter" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Jupyter</span></a> to a reusable script. Both are very practical.</p><p>Both are great fun to watch - send your friends: 9:00 CET, <a href="https://coderefinery.github.io/2024-03-12-workshop/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">coderefinery.github.io/2024-03</span><span class="invisible">-12-workshop/</span></a></p><p><a href="https://fosstodon.org/tags/SciComp" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SciComp</span></a> <a href="https://fosstodon.org/tags/git" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>git</span></a> <a href="https://fosstodon.org/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ReproducibleResearch</span></a> <a href="https://fosstodon.org/tags/OpenScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>OpenScience</span></a></p>
CodeRefinery<p>Have you seen this sign in your lab or elsewhere and wondered what it means? (<a href="https://github.com/louim/in-case-of-fire/blob/master/in_case_of_fire.png" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">github.com/louim/in-case-of-fi</span><span class="invisible">re/blob/master/in_case_of_fire.png</span></a>)</p><p>-> The <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> workshop next week gets you started with version control with <a href="https://fosstodon.org/tags/git" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>git</span></a> so that you can protect your work, not only "in case of fire"; and many more topics around code development for research!</p><p>More info and registration at: <a href="https://coderefinery.github.io/2024-03-12-workshop/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">coderefinery.github.io/2024-03</span><span class="invisible">-12-workshop/</span></a></p>
CodeRefinery<p>Maybe you have heard about <a href="https://fosstodon.org/tags/FAIRdata" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>FAIRdata</span></a>, but do you know about <a href="https://fosstodon.org/tags/FAIR" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>FAIR</span></a> software? If you write code for research, this is an important concept for reusability of your code.</p><p>-> join the <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> workshop to learn how you can take small steps towards producing more FAIR Research Software.</p><p>More information and registration:<br><a href="https://coderefinery.github.io/2024-03-12-workshop/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">coderefinery.github.io/2024-03</span><span class="invisible">-12-workshop/</span></a></p><p><a href="https://fosstodon.org/tags/RSEng" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RSEng</span></a></p>
CodeRefinery<p>The <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> in-person meeting week has started.</p><p>In the morning, we talked about Git lesson design (how can we make it reflect real work better?).</p><p>In the afternoon we shared how we process workshop videos - many of us had never done it before, and it's actually pretty fast and powerful.</p>
CodeRefinery<p>Registration for our March <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> workshop is now open:</p><p><a href="https://coderefinery.github.io/2024-03-12-workshop/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">coderefinery.github.io/2024-03</span><span class="invisible">-12-workshop/</span></a></p><p>The workshop covers good coding practices, reproducible research principles, and using Git for collaboration. It offers breakout room exercises with team leaders, and you can register as a team or volunteer as a team leader. But you can also follow on your own if you prefer. In-person exercise sessions are available in some locations.</p><p>You can also help us by letting your colleagues or friends know.</p>
CodeRefinery<p><a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> team meeting summary 2024-01-22</p><p>Preparing for "CodeRefinery future" discussion (later today), in-person writing retreat, and the March workshop.</p><p>For the March workshop, most likely: We focus on week 1 (Git). Week 2 will happen if we have enough (new) partners get involved to make it possible (please join us!).</p><p>We will try to make it more clear that workshop week 2 is different than week 1.</p>
CodeRefinery<p><a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> team meeting summary 2024-01-15</p><p>In-person meet-up confirmed Feb 26 - Mar 1.</p><p>Next week we have a special meeting about CodeRefinery future (let us know if you want to take part in either of these).</p><p>Spring workshop still on track, with week 1 on Mar 12-14. We’ll revise the Git material to better match what people do these days, and somehow improve week 2 to better reflect the intrinsic difference in how it’s taught.</p>
CodeRefinery<p><a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> team meeting summary 2024-01-08</p><p>Planning in-person meeting (likely in Tromsø, 26. Feb - 1. Mar) where we will work on material and on project future.</p><p>Planning upcoming workshop - perhaps separate week 1 (Git) from week 2 (reproducible research).</p><p>Thinking of ways for projects and organizations to be able to request and fund dedicated workshops. If any of these appeal to you, get in touch.</p>
CodeRefinery<p>We have collected the feedback and our lessons learned from the September 2023 online <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> workshop in a blog post:</p><p><a href="https://coderefinery.org/blog/2023/12/05/lessons-learned-sep-2023/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">coderefinery.org/blog/2023/12/</span><span class="invisible">05/lessons-learned-sep-2023/</span></a></p><p>These lessons learned will form the basis for our 2024 events.</p>
Aalto Scientific Computing<p>How can you access our <a href="https://fosstodon.org/tags/PythonForSciComp" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PythonForSciComp</span></a> videos without YouTube? Via this repository, <a href="https://fosstodon.org/tags/GitAnnex" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>GitAnnex</span></a> to distribute raw videos around. One of those places is a publicly accessible object storage, and with a few commands you can download the processed videos. <a href="https://github.com/coderefinery/video-processing/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">github.com/coderefinery/video-</span><span class="invisible">processing/</span></a></p><p>Problem: yes, git-annex installation is a barrier. This isn't designed as a primary access method but a backup.</p><p><a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a></p>
CodeRefinery<p>Team meeting summary 2023-11-20: </p><p>We are waiting for more of the team to be back from vacation, but there were many good ideas about our future from the <a href="https://fosstodon.org/tags/SuperComputing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SuperComputing</span></a> conference last week. We have good materials, but need to figure out how to best use and share them in the future. <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a></p>
CodeRefinery<p>In one hour (12:00 CEST), last session of <a href="https://fosstodon.org/tags/CodeRefinery" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CodeRefinery</span></a> workshop: "modular code". Despite the name it's a tour across many levels like:<br>- start with <a href="https://fosstodon.org/tags/Jupyter" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Jupyter</span></a> notebook making plot<br>- Split it into functions so it can be configured<br>- <a href="https://fosstodon.org/tags/UnitTests" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>UnitTests</span></a><br>- <a href="https://fosstodon.org/tags/CommandLine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CommandLine</span></a> script to automate even better<br>- Long script to modules for more reuse<br>- more?</p><p>It's a demo of the whole path a <a href="https://fosstodon.org/tags/researcher" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>researcher</span></a> might take from "try stuff out" to "I need to do this many times"<br><a href="https://fosstodon.org/tags/RSEng" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RSEng</span></a> <a href="https://fosstodon.org/tags/OpenScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>OpenScience</span></a> <a href="https://fosstodon.org/tags/ReproducibleResearch" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ReproducibleResearch</span></a></p>
ExploreLive feeds
Mastodon is the best way to keep up with what's happening.
Follow anyone across the fediverse and see it all in chronological order. No algorithms, ads, or clickbait in sight.
LoginDrag & drop to upload